BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E12LP1|AL426387
(826 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1792 1597 0.0
>3x_Contig1792
Length = 28468
Score = 1597 bits (805), Expect = 0.0
Identities = 822/827 (99%), Gaps = 1/827 (0%)
Strand = Plus / Minus
Query: 1 cagaagcaatttggacctggcccttgccggaacga-aatagatgtccaacggtgtgtcat 59
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 26493 cagaagcaatttggacctggcccttgccggaacggcaagtgatgtccaacggtgtgtcat 26434
Query: 60 gagcacgaatgtgtacgactgggaattactggagcccctgctgctaatgaaacaactgga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26433 gagcacgaatgtgtacgactgggaattactggagcccctgctgctaatgaaacaactgga 26374
Query: 120 tgatgaaggtcccggaatcaatgttagtcttggtgtgcatccctggtattgccatttata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26373 tgatgaaggtcccggaatcaatgttagtcttggtgtgcatccctggtattgccatttata 26314
Query: 180 tcagttagataggtcgctttctaaggtagggcattataggaattgtcttaaatgtaaaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26313 tcagttagataggtcgctttctaaggtagggcattataggaattgtcttaaatgtaaaga 26254
Query: 240 cgaggtacagttgatggaattggtagagcaattgccggatccagtagatttgtcaagtta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26253 cgaggtacagttgatggaattggtagagcaattgccggatccagtagatttgtcaagtta 26194
Query: 300 cttgtcagatgagcgggtttctcgtgtgggttgtattggcgagatcggattggacaaggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26193 cttgtcagatgagcgggtttctcgtgtgggttgtattggcgagatcggattggacaaggt 26134
Query: 360 ttttcggttgcctcagaatggctttctcgtgagcmataatgggacatcgttggaaagaag 419
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 26133 ttttcggttgcctcagaatggctttctcgtgagcaataatgggacatcgttggaaagaag 26074
Query: 420 tagtttaagcaatgtaagggtagagtttgcacatcagatccaggtatttgaaacgttatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26073 tagtttaagcaatgtaagggtagagtttgcacatcagatccaggtatttgaaacgttatt 26014
Query: 480 aaaagttgcaaagggaagggggttgccggtttcgatccattctgtgaaatgtcaaggtac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26013 aaaagttgcaaagggaagggggttgccggtttcgatccattctgtgaaatgtcaaggtac 25954
Query: 540 tacttttgatatttgcaagagaatattattggatagcgaggtgaacatatgtttgcactc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25953 tacttttgatatttgcaagagaatattattggatagcgaggtgaacatatgtttgcactc 25894
Query: 600 gtttactgggacattggatacggtgcggctatggctggcgaatttcccacatgaacggct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25893 gtttactgggacattggatacggtgcggctatggctggcgaatttcccacatgaacggct 25834
Query: 660 tttctttagcgtttcgtgttggatcaacttgaaagactgggattctggtgctgagctgtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25833 tttctttagcgtttcgtgttggatcaacttgaaagactgggattctggtgctgagctgtt 25774
Query: 720 gaagagtttgcccttgcagtgtattttgacagagacagattgttctgtggattcagtgtc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25773 gaagagtttgcccttgcagtgtattttgacagagacagattgttctgtggattcagtgtc 25714
Query: 780 gtcgcaagagcaacgacagatgctagattccgttcttgacgccattt 826
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25713 gtcgcaagagcaacgacagatgctagattccgttcttgacgccattt 25667
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4786
Number of Sequences: 1807
Number of extensions: 4786
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 826
length of database: 10,358,551
effective HSP length: 16
effective length of query: 810
effective length of database: 10,329,639
effective search space: 8367007590
effective search space used: 8367007590
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)